Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Gm28385-201ENSMUST00000185671 292 ntBASIC6.65□□□□□ -1.34
HttP42859 Gm5334-201ENSMUST00000187472 720 ntBASIC6.65□□□□□ -1.34
HttP42859 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HttP42859 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
HttP42859 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Trio-210ENSMUST00000227337 6375 ntBASIC6.65□□□□□ -1.34
HttP42859 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Gm14881-201ENSMUST00000120366 372 ntBASIC6.65□□□□□ -1.34
HttP42859 Gm5087-204ENSMUST00000225820 645 ntBASIC6.65□□□□□ -1.34
HttP42859 Gm10064-201ENSMUST00000071235 399 ntBASIC6.65□□□□□ -1.34
HttP42859 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HttP42859 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
HttP42859 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.65□□□□□ -1.35
HttP42859 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
HttP42859 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
HttP42859 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.65□□□□□ -1.35
HttP42859 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Gm22499-201ENSMUST00000104501 135 ntBASIC6.65□□□□□ -1.35
HttP42859 Mir1947-201ENSMUST00000158235 85 ntBASIC6.65□□□□□ -1.35
HttP42859 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC6.65□□□□□ -1.35
HttP42859 Gm28429-201ENSMUST00000188521 363 ntBASIC6.65□□□□□ -1.35
HttP42859 Gm44111-201ENSMUST00000204649 399 ntBASIC6.65□□□□□ -1.35
HttP42859 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.65□□□□□ -1.35
HttP42859 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.65□□□□□ -1.35
HttP42859 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HttP42859 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.65□□□□□ -1.35
HttP42859 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
HttP42859 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.64□□□□□ -1.35
HttP42859 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm19972-201ENSMUST00000218180 5664 ntBASIC6.64□□□□□ -1.35
HttP42859 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.64□□□□□ -1.35
HttP42859 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HttP42859 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.64□□□□□ -1.35
HttP42859 Gm18247-201ENSMUST00000222937 601 ntBASIC6.64□□□□□ -1.35
HttP42859 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 AC153955.4-201ENSMUST00000217069 2752 ntBASIC6.64□□□□□ -1.35
HttP42859 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.64□□□□□ -1.35
HttP42859 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
HttP42859 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.64□□□□□ -1.35
HttP42859 Mir449c-201ENSMUST00000102192 109 ntBASIC6.64□□□□□ -1.35
HttP42859 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm5372-201ENSMUST00000187540 409 ntBASIC6.64□□□□□ -1.35
HttP42859 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.64□□□□□ -1.35
HttP42859 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.64□□□□□ -1.35
HttP42859 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HttP42859 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms