Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 CT030185.1-201ENSMUST00000222940 2289 ntBASIC9.7□□□□□ -0.86
Chd1P40201 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd1P40201 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC9.7□□□□□ -0.86
Chd1P40201 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Chd1P40201 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Chd1P40201 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC9.69□□□□□ -0.86
Chd1P40201 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.69□□□□□ -0.86
Chd1P40201 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Chd1P40201 Gm15158-201ENSMUST00000120577 570 ntBASIC9.69□□□□□ -0.86
Chd1P40201 Gm12317-201ENSMUST00000122307 319 ntBASIC9.69□□□□□ -0.86
Chd1P40201 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd1P40201 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Gm23276-201ENSMUST00000157913 138 ntBASIC9.69□□□□□ -0.86
Chd1P40201 Mir1963-201ENSMUST00000158594 59 ntBASIC9.69□□□□□ -0.86
Chd1P40201 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC9.69□□□□□ -0.86
Chd1P40201 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd1P40201 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC9.69□□□□□ -0.86
Chd1P40201 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Gm19189-201ENSMUST00000221689 754 ntBASIC9.69□□□□□ -0.86
Chd1P40201 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Chd1P40201 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Chd1P40201 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Chd1P40201 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Chd1P40201 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC9.69□□□□□ -0.86
Chd1P40201 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Chd1P40201 Gm43190-201ENSMUST00000187850 1779 ntBASIC9.69□□□□□ -0.86
Chd1P40201 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC9.69□□□□□ -0.86
Chd1P40201 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd1P40201 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd1P40201 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Chd1P40201 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Chd1P40201 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 Gm14550-201ENSMUST00000117918 407 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm13531-201ENSMUST00000121893 543 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Chd1P40201 Gm23233-201ENSMUST00000157301 137 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm25489-201ENSMUST00000158727 141 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC9.68□□□□□ -0.86
Chd1P40201 Mir7031-201ENSMUST00000183860 65 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm30694-201ENSMUST00000209278 1230 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm45249-201ENSMUST00000211021 348 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm18781-201ENSMUST00000211252 924 ntBASIC9.68□□□□□ -0.86
Chd1P40201 CT030175.1-201ENSMUST00000220822 408 ntBASIC9.68□□□□□ -0.86
Chd1P40201 AC123665.6-201ENSMUST00000228568 538 ntBASIC9.68□□□□□ -0.86
Chd1P40201 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 Rian-209ENSMUST00000182406 3476 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Gm37686-201ENSMUST00000194099 2309 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Gm26078-201ENSMUST00000104067 128 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm11787-201ENSMUST00000121996 1050 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm22959-201ENSMUST00000122514 303 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC9.68□□□□□ -0.86
Chd1P40201 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC9.68□□□□□ -0.86
Chd1P40201 Gm15930-201ENSMUST00000156603 2037 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Gm26381-201ENSMUST00000174895 92 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Chd1P40201 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC9.68□□□□□ -0.86
Chd1P40201 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 Gm42502-201ENSMUST00000198550 1089 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Chd1P40201 AC154806.3-201ENSMUST00000227376 439 ntBASIC9.68□□□□□ -0.86
Chd1P40201 AC154806.4-201ENSMUST00000227406 439 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Chd1P40201 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd1P40201 n-R5s56-201ENSMUST00000082521 105 ntBASIC9.68□□□□□ -0.86
Chd1P40201 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Chd1P40201 Gm37238-201ENSMUST00000195552 2390 ntBASIC9.67□□□□□ -0.86
Chd1P40201 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms