Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Traf1P39428 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Traf1P39428 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Traf1P39428 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Traf1P39428 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Gm9575-201ENSMUST00000122140 1339 ntBASIC7.74□□□□□ -1.17
Traf1P39428 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Traf1P39428 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Traf1P39428 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Traf1P39428 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.74□□□□□ -1.17
Traf1P39428 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
Traf1P39428 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Traf1P39428 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Traf1P39428 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.73□□□□□ -1.17
Traf1P39428 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.73□□□□□ -1.17
Traf1P39428 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.73□□□□□ -1.17
Traf1P39428 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Traf1P39428 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Gm27804-201ENSMUST00000185135 119 ntBASIC7.73□□□□□ -1.17
Traf1P39428 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.73□□□□□ -1.17
Traf1P39428 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.73□□□□□ -1.17
Traf1P39428 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Traf1P39428 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Traf1P39428 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Traf1P39428 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Traf1P39428 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Traf1P39428 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Traf1P39428 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Traf1P39428 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Gm14158-201ENSMUST00000118409 308 ntBASIC7.72□□□□□ -1.17
Traf1P39428 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.72□□□□□ -1.17
Traf1P39428 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Gm25904-201ENSMUST00000158491 143 ntBASIC7.72□□□□□ -1.17
Traf1P39428 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.72□□□□□ -1.17
Traf1P39428 Gm29464-201ENSMUST00000187692 513 ntBASIC7.72□□□□□ -1.17
Traf1P39428 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.72□□□□□ -1.17
Traf1P39428 Gm29784-201ENSMUST00000196217 406 ntBASIC7.72□□□□□ -1.17
Traf1P39428 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.72□□□□□ -1.17
Traf1P39428 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.72□□□□□ -1.17
Traf1P39428 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.72□□□□□ -1.17
Traf1P39428 Gm7413-201ENSMUST00000219498 462 ntBASIC7.72□□□□□ -1.17
Traf1P39428 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.72□□□□□ -1.17
Traf1P39428 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC7.72□□□□□ -1.17
Traf1P39428 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Traf1P39428 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Traf1P39428 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Traf1P39428 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
Traf1P39428 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Traf1P39428 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Traf1P39428 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms