Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm43105-201ENSMUST00000202987 459 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm7802-201ENSMUST00000216464 262 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.65□□□□□ -1.18
Col1a1P11087 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm5582-201ENSMUST00000075251 522 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.65□□□□□ -1.18
Col1a1P11087 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Col1a1P11087 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Col1a1P11087 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Col1a1P11087 Gm38036-201ENSMUST00000194586 3564 ntBASIC7.65□□□□□ -1.19
Col1a1P11087 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.65□□□□□ -1.19
Col1a1P11087 Rian-209ENSMUST00000182406 3476 ntBASIC7.65□□□□□ -1.19
Col1a1P11087 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.65□□□□□ -1.19
Col1a1P11087 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col1a1P11087 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.65□□□□□ -1.19
Col1a1P11087 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col1a1P11087 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.19
Col1a1P11087 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Col1a1P11087 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC7.64□□□□□ -1.19
Col1a1P11087 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col1a1P11087 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Gm22194-201ENSMUST00000116869 95 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 Gm15901-201ENSMUST00000117663 941 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 Gm13013-201ENSMUST00000119087 523 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 Gm23408-201ENSMUST00000158523 265 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.64□□□□□ -1.19
Col1a1P11087 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Gm8929-201ENSMUST00000197781 1132 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col1a1P11087 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col1a1P11087 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Gm37864-201ENSMUST00000195308 3075 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col1a1P11087 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
Col1a1P11087 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Col1a1P11087 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.64□□□□□ -1.19
Col1a1P11087 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col1a1P11087 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Grik1-209ENSMUST00000227986 2942 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm22952-201ENSMUST00000116720 120 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gm14300-201ENSMUST00000120800 946 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm3715-201ENSMUST00000172308 617 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gm18833-201ENSMUST00000173218 862 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gm25065-201ENSMUST00000177914 132 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm25891-201ENSMUST00000180050 132 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gm26923-201ENSMUST00000182615 996 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm37770-201ENSMUST00000192855 772 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.63□□□□□ -1.19
Col1a1P11087 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm8930-201ENSMUST00000201693 768 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm46223-201ENSMUST00000215196 675 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 AC154595.2-201ENSMUST00000225067 310 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 AC166105.1-201ENSMUST00000227512 482 ntBASIC7.63□□□□□ -1.19
Col1a1P11087 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Col1a1P11087 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Col1a1P11087 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col1a1P11087 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col1a1P11087 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms