Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm1988-201ENSMUST00000188190 2565 ntBASIC6.42□□□□□ -1.38
Hoxd3P09027 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Hoxd3P09027 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Hoxd3P09027 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm42692-201ENSMUST00000199482 2833 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm15925-201ENSMUST00000120641 1881 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm25761-201ENSMUST00000103983 128 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm25762-201ENSMUST00000103984 132 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm13879-201ENSMUST00000118308 242 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm15312-201ENSMUST00000118827 271 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm8855-201ENSMUST00000118888 878 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm15062-201ENSMUST00000120567 367 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm15309-201ENSMUST00000121644 240 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm24748-201ENSMUST00000157836 108 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm23977-201ENSMUST00000177871 74 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Snhg7-201ENSMUST00000181621 139 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm5839-201ENSMUST00000182835 1007 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm37371-201ENSMUST00000194837 392 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm43836-201ENSMUST00000196532 381 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm42634-201ENSMUST00000197362 381 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm45312-201ENSMUST00000210566 311 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm29818-201ENSMUST00000218070 165 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm18704-201ENSMUST00000219736 446 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.41□□□□□ -1.38
Hoxd3P09027 CR974485.1-201ENSMUST00000222408 402 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 AC163660.3-202ENSMUST00000224917 464 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 AC101831.1-201ENSMUST00000228245 691 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm23407-201ENSMUST00000082538 91 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm44423-201ENSMUST00000203746 3158 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm9903-201ENSMUST00000181102 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Hoxd3P09027 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms