Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm13930-201ENSMUST00000118569 368 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm4911-201ENSMUST00000119388 945 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm27030-201ENSMUST00000182551 464 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm27849-201ENSMUST00000183673 125 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm29160-201ENSMUST00000190094 699 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm45473-201ENSMUST00000211452 616 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 CT485607.3-201ENSMUST00000213361 672 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm43557-201ENSMUST00000197100 2370 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 CT030185.1-201ENSMUST00000222940 2289 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 AC133076.2-201ENSMUST00000227678 3532 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm8534-201ENSMUST00000118553 766 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm12099-201ENSMUST00000118660 750 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm4342-201ENSMUST00000118982 367 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm14294-201ENSMUST00000119749 751 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm44239-201ENSMUST00000204228 271 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 CT025667.1-201ENSMUST00000225872 382 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm4994-201ENSMUST00000118379 2187 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm42763-201ENSMUST00000199595 2087 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm16511-201ENSMUST00000120019 564 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm12396-201ENSMUST00000121600 306 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm23031-201ENSMUST00000157998 119 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 Gm10688-201ENSMUST00000214985 520 ntBASIC11.91□□□□□ -0.5
Ccdc180J3QNE4 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Gm16164-201ENSMUST00000160078 468 ntBASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Gm6631-201ENSMUST00000193699 559 ntBASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Gm36262-201ENSMUST00000223274 499 ntBASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc180J3QNE4 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc180J3QNE4 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc180J3QNE4 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc180J3QNE4 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Gm14695-201ENSMUST00000121721 282 ntBASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Gm9292-201ENSMUST00000222008 710 ntBASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc180J3QNE4 AL450321.1-201ENSMUST00000220600 3550 ntBASIC11.88□□□□□ -0.51
Ccdc180J3QNE4 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc180J3QNE4 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ccdc180J3QNE4 Gm7152-201ENSMUST00000163570 605 ntBASIC11.88□□□□□ -0.51
Ccdc180J3QNE4 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC11.88□□□□□ -0.51
Ccdc180J3QNE4 Gm7745-201ENSMUST00000182235 973 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms