Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh1F7BJK1 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh1F7BJK1 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Pcdh1F7BJK1 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Gm18537-202ENSMUST00000206215 1503 ntBASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Pcdh1F7BJK1 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm24462-201ENSMUST00000102430 106 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm22660-201ENSMUST00000104193 130 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm15779-201ENSMUST00000117470 412 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm11796-201ENSMUST00000120208 972 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm14122-201ENSMUST00000122076 973 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm1947-201ENSMUST00000122451 910 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm25845-201ENSMUST00000122588 310 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Mir1962-201ENSMUST00000157516 121 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm23385-201ENSMUST00000158592 295 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Rpain-211ENSMUST00000169965 343 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm25692-201ENSMUST00000175444 125 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm8993-201ENSMUST00000182182 983 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm26968-201ENSMUST00000182894 481 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm8304-201ENSMUST00000185744 584 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm29357-201ENSMUST00000186877 698 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm28113-201ENSMUST00000188280 229 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm38164-201ENSMUST00000192810 330 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm44356-201ENSMUST00000196731 111 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm10416-201ENSMUST00000197379 645 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm4859-201ENSMUST00000199625 787 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm18207-201ENSMUST00000205486 526 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm44566-201ENSMUST00000207638 304 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm8804-201ENSMUST00000212292 798 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm7557-201ENSMUST00000221935 865 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Mir135b-201ENSMUST00000083501 97 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm16391-201ENSMUST00000086601 447 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.46□□□□□ -1.38
Pcdh1F7BJK1 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.45□□□□□ -1.38
Pcdh1F7BJK1 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Pcdh1F7BJK1 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Pcdh1F7BJK1 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Pcdh1F7BJK1 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms