Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Gm8192-201ENSMUST00000182196 958 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Gm43383-201ENSMUST00000195981 469 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Olfr687-201ENSMUST00000098154 938 ntBASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
Srp54bE9PXC0 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Rnu11-201ENSMUST00000104135 134 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm11271-201ENSMUST00000116054 440 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm3810-201ENSMUST00000122413 476 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm6726-201ENSMUST00000172786 681 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm20432-201ENSMUST00000173716 250 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm8183-201ENSMUST00000183134 980 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm5260-201ENSMUST00000186157 949 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm19087-201ENSMUST00000191430 946 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm36935-201ENSMUST00000192526 292 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm38237-201ENSMUST00000193366 376 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm24032-201ENSMUST00000083932 159 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Srp54bE9PXC0 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm44843-201ENSMUST00000208320 1396 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm11920-201ENSMUST00000118491 563 ntBASIC6.59□□□□□ -1.35
Srp54bE9PXC0 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms