Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm8317-201ENSMUST00000121261 471 ntBASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm19840-201ENSMUST00000169624 882 ntBASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm28883-201ENSMUST00000189256 369 ntBASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm37806-201ENSMUST00000194524 6387 ntBASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm19060-201ENSMUST00000201959 421 ntBASIC6.7□□□□□ -1.34
Col4a6B1AVK5 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC6.7□□□□□ -1.34
Col4a6B1AVK5 AC165260.6-205ENSMUST00000224190 9762 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm22312-201ENSMUST00000158005 130 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm8419-201ENSMUST00000189886 412 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm44251-201ENSMUST00000204963 442 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm43618-201ENSMUST00000197392 3451 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Nrk-201ENSMUST00000064937 6604 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.69□□□□□ -1.34
Col4a6B1AVK5 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm8855-201ENSMUST00000118888 878 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm11852-201ENSMUST00000120806 222 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm43105-201ENSMUST00000202987 459 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm2996-201ENSMUST00000211398 537 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col4a6B1AVK5 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 1338.7 ms