Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm14116-201ENSMUST00000117733 805 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm13156-201ENSMUST00000118348 321 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm16298-201ENSMUST00000161107 420 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm25244-201ENSMUST00000178089 132 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm28443-201ENSMUST00000189081 698 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm7804-202ENSMUST00000194187 854 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 AC163621.1-201ENSMUST00000220695 379 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Glycam1-204ENSMUST00000228895 641 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Olfr687-201ENSMUST00000098154 938 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.27□□□□□ -1.4
Upk3aQ9JKX8 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm13768-201ENSMUST00000116469 929 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm14531-201ENSMUST00000120845 285 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm23884-201ENSMUST00000122687 294 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm23674-201ENSMUST00000157473 131 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm2619-202ENSMUST00000166777 651 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm22642-201ENSMUST00000175352 252 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm9127-201ENSMUST00000188041 985 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.27□□□□□ -1.41
Upk3aQ9JKX8 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms