Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm28636-201ENSMUST00000186353 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28452-201ENSMUST00000186623 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29298-201ENSMUST00000186704 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28185-201ENSMUST00000186815 694 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28227-201ENSMUST00000186862 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28796-201ENSMUST00000186905 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29659-201ENSMUST00000187063 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28473-201ENSMUST00000187325 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28558-201ENSMUST00000187373 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28682-201ENSMUST00000187430 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28738-201ENSMUST00000187480 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28949-201ENSMUST00000187805 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28773-201ENSMUST00000187925 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29319-201ENSMUST00000188060 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29422-201ENSMUST00000188062 694 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28734-201ENSMUST00000188104 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28787-201ENSMUST00000188357 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29312-201ENSMUST00000188724 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29451-201ENSMUST00000188862 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29637-201ENSMUST00000188877 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29033-201ENSMUST00000189114 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29614-201ENSMUST00000189263 694 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28751-201ENSMUST00000189287 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29559-201ENSMUST00000189412 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28272-201ENSMUST00000189512 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28483-201ENSMUST00000189519 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28123-201ENSMUST00000189725 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28368-201ENSMUST00000189804 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29119-201ENSMUST00000189973 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28716-201ENSMUST00000190217 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29239-201ENSMUST00000190304 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28837-201ENSMUST00000190397 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28968-201ENSMUST00000190413 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28531-201ENSMUST00000190529 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28165-201ENSMUST00000190669 694 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29072-201ENSMUST00000191149 678 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29181-201ENSMUST00000191288 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm38229-201ENSMUST00000191931 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm32347-201ENSMUST00000192944 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm38121-201ENSMUST00000193213 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm412-201ENSMUST00000193360 948 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm38035-201ENSMUST00000194427 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm38350-201ENSMUST00000194789 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm37990-201ENSMUST00000195821 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm18430-201ENSMUST00000197534 682 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm15242-201ENSMUST00000122459 283 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm24286-201ENSMUST00000157632 128 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm28665-201ENSMUST00000189269 670 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm28413-201ENSMUST00000189369 291 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm17895-201ENSMUST00000194028 874 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm43160-201ENSMUST00000196453 421 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm3511-201ENSMUST00000199823 204 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 AV026068-218ENSMUST00000223980 575 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Smc1aQ9CU62 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Smc1aQ9CU62 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms