Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Mir455-201ENSMUST00000093594 82 ntBASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Cdk5rap3Q99LM2 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm25546-201ENSMUST00000103977 132 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm24284-201ENSMUST00000104240 142 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm26146-201ENSMUST00000104478 185 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm8644-201ENSMUST00000118619 596 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm15149-201ENSMUST00000119370 360 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm13207-201ENSMUST00000119862 773 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm14156-201ENSMUST00000121538 483 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm22569-201ENSMUST00000175545 124 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm4308-201ENSMUST00000179735 914 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm27596-201ENSMUST00000185061 83 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm38217-201ENSMUST00000194358 910 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm17849-201ENSMUST00000219788 853 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.8□□□□□ -1.32
Cdk5rap3Q99LM2 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm14900-201ENSMUST00000120304 733 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm11545-201ENSMUST00000146507 375 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm22820-201ENSMUST00000157205 329 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm25057-201ENSMUST00000157366 88 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm16138-201ENSMUST00000159341 821 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm8506-201ENSMUST00000186661 829 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm5314-201ENSMUST00000204852 466 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm29759-201ENSMUST00000205860 327 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Gm10540-201ENSMUST00000097581 276 ntBASIC6.79□□□□□ -1.32
Cdk5rap3Q99LM2 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 130.2 ms