Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Cstf1Q99LC2 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.72□□□□□ -1.33
Cstf1Q99LC2 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.71□□□□□ -1.33
Cstf1Q99LC2 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Rnu11-201ENSMUST00000104135 134 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm24888-201ENSMUST00000104387 130 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm14614-201ENSMUST00000119873 384 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm14380-201ENSMUST00000122298 431 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm23426-201ENSMUST00000122483 318 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm24065-201ENSMUST00000157487 264 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm22523-201ENSMUST00000158696 100 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Mir5112-201ENSMUST00000174897 60 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm28620-201ENSMUST00000190463 439 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm37135-201ENSMUST00000192652 534 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm37349-201ENSMUST00000194205 624 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm17849-201ENSMUST00000219788 853 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 AC164426.1-201ENSMUST00000225745 929 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.71□□□□□ -1.34
Cstf1Q99LC2 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm12262-201ENSMUST00000119915 305 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm16511-201ENSMUST00000120019 564 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm6693-201ENSMUST00000189583 813 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm37463-201ENSMUST00000193819 796 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm23011-202ENSMUST00000197855 275 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm7463-201ENSMUST00000201541 547 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm44770-201ENSMUST00000205395 1264 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Gm46379-201ENSMUST00000222551 265 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Mir484-201ENSMUST00000093566 67 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Zfp850-201ENSMUST00000099111 941 ntBASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Cstf1Q99LC2 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms