Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm24048-201ENSMUST00000102411 106 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm12242-201ENSMUST00000118824 738 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm13462-201ENSMUST00000121472 961 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm14353-201ENSMUST00000122200 869 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm23888-201ENSMUST00000122690 253 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm25717-201ENSMUST00000158631 353 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm5283-201ENSMUST00000177874 334 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm21728-201ENSMUST00000188442 695 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm21889-201ENSMUST00000188487 695 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20932-201ENSMUST00000189115 694 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm21920-201ENSMUST00000190042 695 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm36965-201ENSMUST00000193797 394 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm43037-201ENSMUST00000196808 250 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm43906-201ENSMUST00000203194 906 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm21054-201ENSMUST00000203981 380 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm44411-201ENSMUST00000204172 349 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm2767-201ENSMUST00000209582 473 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm4042-201ENSMUST00000216946 637 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm7252-201ENSMUST00000223284 456 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm25587-201ENSMUST00000082498 166 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm7731-201ENSMUST00000091759 470 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp11Q99K46 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp11Q99K46 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp11Q99K46 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Usp11Q99K46 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp11Q99K46 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp11Q99K46 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
Usp11Q99K46 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Usp11Q99K46 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Usp11Q99K46 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm11501-201ENSMUST00000118039 581 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm11972-201ENSMUST00000118514 389 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp11Q99K46 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.89□□□□□ -1.31
Usp11Q99K46 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp11Q99K46 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm43089-201ENSMUST00000199162 275 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Usp11Q99K46 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp11Q99K46 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp11Q99K46 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm24405-201ENSMUST00000083033 167 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Mir106b-201ENSMUST00000083580 82 ntBASIC6.89□□□□□ -1.31
Usp11Q99K46 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp11Q99K46 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp11Q99K46 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp11Q99K46 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp11Q99K46 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp11Q99K46 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp11Q99K46 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp11Q99K46 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp11Q99K46 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp11Q99K46 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.88□□□□□ -1.31
Usp11Q99K46 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms