Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.56□□□□□ -1.36
Clrn1Q8K445 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.56□□□□□ -1.36
Clrn1Q8K445 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Clrn1Q8K445 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.56□□□□□ -1.36
Clrn1Q8K445 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 AC164297.4-201ENSMUST00000224225 1307 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm22774-201ENSMUST00000102084 109 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm12635-201ENSMUST00000117285 752 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm12988-201ENSMUST00000119054 478 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm13900-201ENSMUST00000119402 498 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm12005-201ENSMUST00000121451 379 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm11910-201ENSMUST00000121624 432 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-7-201ENSMUST00000180364 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm28688-201ENSMUST00000187301 268 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm37270-201ENSMUST00000194277 330 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-6-201ENSMUST00000196127 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-12-201ENSMUST00000197274 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-5-201ENSMUST00000197439 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-10-201ENSMUST00000197745 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-11-201ENSMUST00000197952 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-4-201ENSMUST00000198665 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-9-201ENSMUST00000200087 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Mir669a-8-201ENSMUST00000200268 87 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm42857-201ENSMUST00000200823 339 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm9240-201ENSMUST00000206527 742 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm45551-201ENSMUST00000211459 928 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm19987-201ENSMUST00000216339 499 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 AC153516.1-201ENSMUST00000217955 779 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm23734-201ENSMUST00000083753 109 ntBASIC6.55□□□□□ -1.36
Clrn1Q8K445 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Clrn1Q8K445 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.54□□□□□ -1.36
Clrn1Q8K445 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Clrn1Q8K445 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms