Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm6061-201ENSMUST00000175860 492 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm10410-201ENSMUST00000180138 384 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm26898-201ENSMUST00000181678 384 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 AC134917.2-201ENSMUST00000223354 124 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Mir296-201ENSMUST00000083587 79 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm7731-201ENSMUST00000091759 470 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Gm45250-201ENSMUST00000209414 3592 ntBASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
Vps53Q8CCB4 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 AC158115.1-201ENSMUST00000222830 3182 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm5133-201ENSMUST00000118940 1255 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm15186-201ENSMUST00000119345 563 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm12540-201ENSMUST00000121938 319 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 BC064078-201ENSMUST00000122939 570 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm23756-201ENSMUST00000157582 114 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm10177-201ENSMUST00000160052 444 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm3841-201ENSMUST00000191399 451 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm36965-201ENSMUST00000193797 394 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm6077-201ENSMUST00000196008 499 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm44111-201ENSMUST00000204649 399 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm45626-201ENSMUST00000210093 361 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm3678-201ENSMUST00000218888 492 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 AC140288.1-201ENSMUST00000226329 503 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
Vps53Q8CCB4 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm13141-201ENSMUST00000117417 456 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm15164-201ENSMUST00000122203 271 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm11341-201ENSMUST00000122316 447 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm17046-201ENSMUST00000168078 850 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm20454-201ENSMUST00000172713 221 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm27186-201ENSMUST00000184223 307 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28739-201ENSMUST00000185415 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28219-201ENSMUST00000185452 696 ntBASIC7.78□□□□□ -1.16
Vps53Q8CCB4 Gm28542-201ENSMUST00000185545 696 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms