Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm24989-201ENSMUST00000104461 88 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm12874-201ENSMUST00000117190 913 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm12713-201ENSMUST00000118404 764 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm16511-201ENSMUST00000120019 564 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm22276-201ENSMUST00000122469 129 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Mir5107-201ENSMUST00000175586 88 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm44163-201ENSMUST00000205140 475 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm7413-201ENSMUST00000219498 462 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm9321-201ENSMUST00000221179 778 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 AC113031.1-201ENSMUST00000227400 432 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.6□□□□□ -1.19
Alx1Q8C8B0 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm15016-201ENSMUST00000117300 720 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm11198-201ENSMUST00000119771 974 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm37135-201ENSMUST00000192652 534 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm43048-201ENSMUST00000196101 388 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 AC099760.1-201ENSMUST00000196300 153 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm43928-201ENSMUST00000203737 409 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Alx1Q8C8B0 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Alx1Q8C8B0 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Mir678-201ENSMUST00000102114 84 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm12937-201ENSMUST00000118333 448 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm7058-201ENSMUST00000119209 902 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm15967-201ENSMUST00000120027 1116 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm37770-201ENSMUST00000192855 772 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm44374-201ENSMUST00000199821 140 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm18805-201ENSMUST00000206872 655 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 AC154563.1-201ENSMUST00000228317 442 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
Alx1Q8C8B0 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.57□□□□□ -1.2
Alx1Q8C8B0 Gm3883-201ENSMUST00000098119 3229 ntBASIC7.57□□□□□ -1.2
Alx1Q8C8B0 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Alx1Q8C8B0 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Alx1Q8C8B0 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Alx1Q8C8B0 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.57□□□□□ -1.2
Alx1Q8C8B0 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Alx1Q8C8B0 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Alx1Q8C8B0 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms