Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm26241-201ENSMUST00000174944 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm23976-201ENSMUST00000175001 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm22463-201ENSMUST00000175274 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm22547-201ENSMUST00000175281 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm22913-201ENSMUST00000175297 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm23282-201ENSMUST00000175306 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm25972-201ENSMUST00000175374 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm22414-201ENSMUST00000175466 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm26235-201ENSMUST00000175533 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm25084-201ENSMUST00000175556 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm24973-201ENSMUST00000175588 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm23292-201ENSMUST00000175618 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Fkbp5-206ENSMUST00000177939 3844 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm23646-201ENSMUST00000178119 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm24643-201ENSMUST00000178305 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm24302-201ENSMUST00000178350 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm26386-201ENSMUST00000178407 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm25458-201ENSMUST00000178981 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm22825-201ENSMUST00000179444 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm8982-201ENSMUST00000184198 1295 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Mir8104-201ENSMUST00000185165 101 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm28654-201ENSMUST00000189801 379 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm33815-205ENSMUST00000195574 1204 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC9.4□□□□□ -0.9
Trim35Q8C006 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 AC069561.3-201ENSMUST00000217321 114 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm9110-201ENSMUST00000219035 617 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 AC124772.3-201ENSMUST00000222535 575 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm9280-201ENSMUST00000223155 517 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 AC140393.4-201ENSMUST00000226994 765 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm28653-202ENSMUST00000227082 521 ntBASIC9.4□□□□□ -0.9
Trim35Q8C006 Lyg1-201ENSMUST00000027254 800 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Trim35Q8C006 Smok3c-201ENSMUST00000110967 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gm16287-201ENSMUST00000097827 2324 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Lipa-202ENSMUST00000178114 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Melk-201ENSMUST00000045607 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Scmh1-204ENSMUST00000106301 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Trim35Q8C006 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim35Q8C006 Mical3-201ENSMUST00000077159 2875 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Trim35Q8C006 Numb-204ENSMUST00000117217 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim35Q8C006 Sult5a1-201ENSMUST00000000755 3805 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim35Q8C006 Gm9583-201ENSMUST00000219613 1843 ntBASIC9.4□□□□□ -0.91
Trim35Q8C006 Zfp408-201ENSMUST00000099714 3469 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Trim35Q8C006 Ywhae-201ENSMUST00000067664 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Trim35Q8C006 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Trim35Q8C006 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.4□□□□□ -0.91
Trim35Q8C006 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Trim35Q8C006 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Itgb2l-201ENSMUST00000000161 2633 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Igsf5-203ENSMUST00000113794 1601 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Pnp-201ENSMUST00000178092 1306 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm14735-201ENSMUST00000121772 3088 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Cyp2d22-201ENSMUST00000023083 2771 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm37685-201ENSMUST00000193507 2177 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Eif2d-201ENSMUST00000068791 3316 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Wfdc6a-202ENSMUST00000109342 796 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm23213-201ENSMUST00000122715 313 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm16104-201ENSMUST00000156260 401 ntTSL 2 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm25333-201ENSMUST00000158035 246 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC9.39□□□□□ -0.91
Trim35Q8C006 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm28665-201ENSMUST00000189269 670 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm9722-201ENSMUST00000194568 802 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm42789-201ENSMUST00000202276 567 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Crs-ps-201ENSMUST00000203723 760 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm34280-201ENSMUST00000208250 2114 ntTSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 AC134537.1-201ENSMUST00000219205 265 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Olfr151-202ENSMUST00000221099 929 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Vamp3-201ENSMUST00000030797 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Olfr1415-201ENSMUST00000071521 936 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Phc1-201ENSMUST00000079560 3839 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm10581-201ENSMUST00000097986 231 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms