Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm25904-201ENSMUST00000158491 143 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm3650-201ENSMUST00000180600 747 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm28438-201ENSMUST00000188299 345 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37177-201ENSMUST00000193768 417 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm18600-201ENSMUST00000207205 505 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm22684-201ENSMUST00000082849 132 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sh3rf2Q8BZT2 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm25509-201ENSMUST00000116985 106 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm11462-201ENSMUST00000117749 562 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm11920-201ENSMUST00000118491 563 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm15502-201ENSMUST00000121449 208 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm22342-201ENSMUST00000122647 298 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm9064-201ENSMUST00000163579 566 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm18447-201ENSMUST00000187501 307 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm412-201ENSMUST00000193360 948 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm37676-201ENSMUST00000195496 507 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Gm7554-201ENSMUST00000202282 574 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Sh3rf2Q8BZT2 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.74□□□□□ -1.33
Sh3rf2Q8BZT2 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.74□□□□□ -1.33
Sh3rf2Q8BZT2 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Sh3rf2Q8BZT2 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Sh3rf2Q8BZT2 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sh3rf2Q8BZT2 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sh3rf2Q8BZT2 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sh3rf2Q8BZT2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms