Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm24989-201ENSMUST00000104461 88 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm15901-201ENSMUST00000117663 941 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm12442-201ENSMUST00000118372 338 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm11879-201ENSMUST00000121885 702 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm12152-201ENSMUST00000122465 684 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm4660-201ENSMUST00000131499 403 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm18799-201ENSMUST00000189104 913 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm5694-201ENSMUST00000195648 641 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm8454-201ENSMUST00000196980 811 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm43233-201ENSMUST00000200491 616 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm38574-201ENSMUST00000211855 640 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 AC154219.1-201ENSMUST00000220764 1262 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 AC159635.1-201ENSMUST00000220905 2102 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm2531-201ENSMUST00000075609 512 ntBASIC9.18□□□□□ -0.94
Usp47Q8BY87 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Usp47Q8BY87 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm43285-201ENSMUST00000196563 3592 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm37864-201ENSMUST00000195308 3075 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 CT025535.2-201ENSMUST00000228572 7441 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm24709-201ENSMUST00000104123 132 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm15016-201ENSMUST00000117300 720 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm7658-201ENSMUST00000119064 1124 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm13626-201ENSMUST00000119435 402 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm14925-201ENSMUST00000120611 438 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm14054-201ENSMUST00000120744 704 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm14457-201ENSMUST00000148069 1161 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm45485-201ENSMUST00000211229 357 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm19212-201ENSMUST00000216642 862 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Cma2-202ENSMUST00000228263 857 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Thap6-201ENSMUST00000191860 3151 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Gm28379-202ENSMUST00000187676 2896 ntBASIC9.17□□□□□ -0.94
Usp47Q8BY87 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Usp47Q8BY87 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm12565-201ENSMUST00000119004 649 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp47Q8BY87 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 AC154642.1-201ENSMUST00000224173 740 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 AC116319.2-201ENSMUST00000228159 984 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm28392-201ENSMUST00000077630 393 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Mir3068-201ENSMUST00000083004 136 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 n-R5s89-201ENSMUST00000083532 104 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm22351-201ENSMUST00000083925 107 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms