Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Pcdh19Q80TF3 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Pcdh19Q80TF3 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm11865-201ENSMUST00000118093 859 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm16383-201ENSMUST00000118122 232 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Defa-ps14-201ENSMUST00000121373 418 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm22025-201ENSMUST00000122734 302 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm25219-201ENSMUST00000157545 330 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm6650-201ENSMUST00000166710 614 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm23187-201ENSMUST00000175746 86 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm20561-201ENSMUST00000188131 292 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm37225-201ENSMUST00000193423 325 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm20223-201ENSMUST00000199932 805 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm7492-201ENSMUST00000201745 725 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm32842-201ENSMUST00000212653 738 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm18789-201ENSMUST00000216115 550 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm6667-201ENSMUST00000217169 564 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 AC144783.1-201ENSMUST00000219103 960 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 AC158981.1-201ENSMUST00000226943 1205 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm22578-201ENSMUST00000083730 107 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Pcdh19Q80TF3 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm37163-201ENSMUST00000195439 1690 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm12393-201ENSMUST00000117084 848 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm11845-201ENSMUST00000117886 327 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm7910-201ENSMUST00000117896 835 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm15913-201ENSMUST00000118492 331 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm16056-201ENSMUST00000119293 135 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm12189-201ENSMUST00000119779 912 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm13808-201ENSMUST00000121353 184 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm8080-201ENSMUST00000122046 1155 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm24139-201ENSMUST00000122780 288 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm24236-201ENSMUST00000157794 134 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm23259-201ENSMUST00000158318 303 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm20702-201ENSMUST00000176181 460 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm6489-201ENSMUST00000178167 696 ntBASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Pcdh19Q80TF3 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms