Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm25120-201ENSMUST00000180148 79 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm27659-201ENSMUST00000183472 98 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm27373-201ENSMUST00000184017 184 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm28428-201ENSMUST00000188886 697 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm5252-201ENSMUST00000189030 909 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm29389-201ENSMUST00000191562 352 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm43007-201ENSMUST00000197618 291 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm43171-201ENSMUST00000199882 291 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm33626-201ENSMUST00000206790 828 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm29817-201ENSMUST00000210098 172 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm45269-201ENSMUST00000210359 282 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm45725-201ENSMUST00000212962 337 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 AC151904.5-201ENSMUST00000218975 549 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC9.65□□□□□ -0.86
Clcn1Q64347 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 AC158392.2-201ENSMUST00000225402 969 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 AC164883.2-201ENSMUST00000227931 3815 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Clcn1Q64347 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Mir365-2-201ENSMUST00000083555 112 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Gm43023-201ENSMUST00000197583 2106 ntBASIC9.65□□□□□ -0.86
Clcn1Q64347 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Clcn1Q64347 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clcn1Q64347 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clcn1Q64347 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clcn1Q64347 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
Clcn1Q64347 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clcn1Q64347 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Clcn1Q64347 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Clcn1Q64347 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 CT010514.1-201ENSMUST00000214088 2969 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm45182-201ENSMUST00000207579 2404 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gosr1-201ENSMUST00000010536 4289 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm18194-202ENSMUST00000210952 3442 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 n-R5s1-201ENSMUST00000101925 119 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm11928-201ENSMUST00000119323 437 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm11371-201ENSMUST00000120294 385 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm3611-201ENSMUST00000173687 877 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm22132-201ENSMUST00000175316 100 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm6472-201ENSMUST00000178147 651 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Mir6921-201ENSMUST00000183719 80 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm37869-201ENSMUST00000193385 595 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm29950-201ENSMUST00000195273 237 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm44258-201ENSMUST00000204925 301 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm18252-203ENSMUST00000215855 757 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 AC101205.1-201ENSMUST00000227916 907 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 AC131033.1-201ENSMUST00000228223 279 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Clcn1Q64347 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Clcn1Q64347 AC122357.1-201ENSMUST00000221652 1515 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Gm37706-201ENSMUST00000195379 2765 ntBASIC9.64□□□□□ -0.87
Clcn1Q64347 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Clcn1Q64347 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms