Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm37225-201ENSMUST00000193423 325 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm8539-201ENSMUST00000199822 501 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm2505-201ENSMUST00000200413 825 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm2544-201ENSMUST00000222702 756 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm23456-201ENSMUST00000083335 137 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Gm38029-201ENSMUST00000192669 2090 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 AC101875.1-201ENSMUST00000222666 2223 ntBASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim41Q5NCC3 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Ephx2-202ENSMUST00000224698 1985 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Mir6986-201ENSMUST00000184483 58 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm28639-201ENSMUST00000191519 481 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm37869-201ENSMUST00000193385 595 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm44356-201ENSMUST00000196731 111 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm44227-201ENSMUST00000203576 241 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm5001-201ENSMUST00000204361 331 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm18410-201ENSMUST00000207199 577 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm45506-201ENSMUST00000211620 280 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Gm18388-201ENSMUST00000222339 557 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 AC124489.3-201ENSMUST00000224037 278 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 AC115304.1-202ENSMUST00000226850 837 ntBASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim41Q5NCC3 Olfr1360-202ENSMUST00000205788 1988 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm16433-201ENSMUST00000062429 1984 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm16179-201ENSMUST00000120685 373 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm13484-201ENSMUST00000120738 412 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm23225-201ENSMUST00000158121 114 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm27659-201ENSMUST00000183472 98 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm7369-201ENSMUST00000192738 936 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm37152-201ENSMUST00000193369 1175 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm4921-201ENSMUST00000219804 992 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Mir365-2-201ENSMUST00000083555 112 ntBASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trim41Q5NCC3 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim41Q5NCC3 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms