Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm14513-201ENSMUST00000117403 123 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm12375-201ENSMUST00000119331 921 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm15750-201ENSMUST00000120970 616 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm6264-201ENSMUST00000160802 624 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm22642-201ENSMUST00000175352 252 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm4856-201ENSMUST00000192696 1091 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm2229-201ENSMUST00000193328 710 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm44265-201ENSMUST00000203631 465 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm44279-201ENSMUST00000205154 472 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm30646-201ENSMUST00000207662 180 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm8607-201ENSMUST00000221864 431 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 AC124450.1-201ENSMUST00000225569 495 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 AC116591.1-201ENSMUST00000227919 351 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Gm21731-201ENSMUST00000079524 489 ntBASIC7□□□□□ -1.29
Upf3bQ3ULL6 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7□□□□□ -1.29
Upf3bQ3ULL6 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm25760-201ENSMUST00000103989 132 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm24173-201ENSMUST00000104130 128 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm11318-201ENSMUST00000118640 961 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm8648-201ENSMUST00000122457 221 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm25675-201ENSMUST00000174979 118 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm20637-201ENSMUST00000175715 462 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm25244-201ENSMUST00000178089 132 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Mir7669-201ENSMUST00000183442 58 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm18447-201ENSMUST00000187501 307 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm37380-201ENSMUST00000193752 397 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm20926-201ENSMUST00000194457 696 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm2767-201ENSMUST00000209582 473 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm5341-201ENSMUST00000058881 489 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm24405-201ENSMUST00000083033 167 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upf3bQ3ULL6 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Upf3bQ3ULL6 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upf3bQ3ULL6 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Upf3bQ3ULL6 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms