Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim43aQ3TL54 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.94□□□□□ -1.3
Trim43aQ3TL54 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.94□□□□□ -1.3
Trim43aQ3TL54 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Trim43aQ3TL54 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim43aQ3TL54 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm26419-201ENSMUST00000104272 133 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm25379-201ENSMUST00000104338 114 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm13732-201ENSMUST00000117753 535 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm11689-201ENSMUST00000120766 302 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm14300-201ENSMUST00000120800 946 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm15242-201ENSMUST00000122459 283 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm21839-201ENSMUST00000179536 378 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm27152-201ENSMUST00000183828 99 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Mir6908-201ENSMUST00000184056 63 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Mir6241-201ENSMUST00000184225 103 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm43141-201ENSMUST00000199695 274 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm9788-201ENSMUST00000057038 906 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim43aQ3TL54 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm14513-201ENSMUST00000117403 123 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm13724-201ENSMUST00000122395 1155 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm25989-201ENSMUST00000158761 133 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm22533-201ENSMUST00000158821 274 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm6434-201ENSMUST00000163316 372 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm3760-201ENSMUST00000167475 804 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Mir6367-201ENSMUST00000183385 102 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm27185-201ENSMUST00000184296 247 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm29383-201ENSMUST00000188284 480 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm34144-201ENSMUST00000197039 259 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim43aQ3TL54 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.92□□□□□ -1.3
Trim43aQ3TL54 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms