Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm46103-201ENSMUST00000217614 341 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm46424-201ENSMUST00000221567 168 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm4822-201ENSMUST00000077551 479 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Col8a1Q00780 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Fbxw10-201ENSMUST00000036085 3354 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gm44916-201ENSMUST00000208664 2194 ntBASIC6.23□□□□□ -1.41
Col8a1Q00780 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col8a1Q00780 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a1Q00780 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm42576-201ENSMUST00000202336 2846 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm14802-201ENSMUST00000121944 1885 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm10623-201ENSMUST00000209081 2639 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 AC120347.1-201ENSMUST00000223326 1639 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 AC122357.2-201ENSMUST00000220732 1525 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm22256-201ENSMUST00000102291 107 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm14932-201ENSMUST00000117112 453 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm14116-201ENSMUST00000117733 805 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm9005-201ENSMUST00000119908 607 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm13902-201ENSMUST00000120168 605 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm15166-201ENSMUST00000120790 385 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm11472-201ENSMUST00000121305 556 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm23533-201ENSMUST00000157540 245 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm26183-201ENSMUST00000157685 139 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm23046-201ENSMUST00000158369 284 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm22428-201ENSMUST00000158554 132 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm28586-201ENSMUST00000189857 456 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm43382-201ENSMUST00000198954 838 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm43004-201ENSMUST00000201872 703 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm34583-203ENSMUST00000202586 454 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm44234-201ENSMUST00000204246 900 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a1Q00780 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm7413-201ENSMUST00000219498 462 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.22□□□□□ -1.41
Col8a1Q00780 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a1Q00780 Gm5374-201ENSMUST00000222868 657 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms