Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Scn1bP97952 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm23484-201ENSMUST00000104178 131 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gm11976-201ENSMUST00000119236 295 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gm22885-201ENSMUST00000157410 107 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gm25770-201ENSMUST00000158566 115 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Scn1bP97952 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm19596-201ENSMUST00000203685 739 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm24046-201ENSMUST00000083111 165 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Scn1bP97952 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Scn1bP97952 Dnm3os-201ENSMUST00000139662 7928 ntBASIC6.01□□□□□ -1.45
Scn1bP97952 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Scn1bP97952 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Scn1bP97952 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6□□□□□ -1.45
Scn1bP97952 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Scn1bP97952 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6□□□□□ -1.45
Scn1bP97952 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Scn1bP97952 Gm22439-201ENSMUST00000104048 132 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm6754-201ENSMUST00000117124 913 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm6620-201ENSMUST00000120113 715 ntBASIC6□□□□□ -1.45
Scn1bP97952 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6□□□□□ -1.45
Scn1bP97952 Gm16026-205ENSMUST00000162923 641 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6□□□□□ -1.45
Scn1bP97952 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6□□□□□ -1.45
Scn1bP97952 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6□□□□□ -1.45
Scn1bP97952 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6□□□□□ -1.45
Scn1bP97952 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6□□□□□ -1.45
Scn1bP97952 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6□□□□□ -1.45
Scn1bP97952 Gm37493-201ENSMUST00000193167 433 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm2979-201ENSMUST00000193442 463 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm37676-201ENSMUST00000195496 507 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6□□□□□ -1.45
Scn1bP97952 Gm3511-201ENSMUST00000199823 204 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm43812-202ENSMUST00000202701 581 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6□□□□□ -1.45
Scn1bP97952 Gm44770-201ENSMUST00000205395 1264 ntBASIC6□□□□□ -1.45
Scn1bP97952 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6□□□□□ -1.45
Scn1bP97952 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC6□□□□□ -1.45
Scn1bP97952 Gm7972-201ENSMUST00000208434 1137 ntBASIC6□□□□□ -1.45
Scn1bP97952 AC069561.1-201ENSMUST00000213750 424 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm6581-201ENSMUST00000214545 260 ntBASIC6□□□□□ -1.45
Scn1bP97952 AC151971.2-201ENSMUST00000217540 909 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm19217-201ENSMUST00000218238 328 ntBASIC6□□□□□ -1.45
Scn1bP97952 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6□□□□□ -1.45
Scn1bP97952 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6□□□□□ -1.45
Scn1bP97952 AV026068-219ENSMUST00000224148 933 ntBASIC6□□□□□ -1.45
Scn1bP97952 AC154838.2-201ENSMUST00000226602 747 ntBASIC6□□□□□ -1.45
Scn1bP97952 CT009556.4-201ENSMUST00000227092 200 ntBASIC6□□□□□ -1.45
Scn1bP97952 AC154283.1-201ENSMUST00000228417 389 ntBASIC6□□□□□ -1.45
Scn1bP97952 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Scn1bP97952 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Scn1bP97952 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6□□□□□ -1.45
Scn1bP97952 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Scn1bP97952 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms