Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Nkx3-1P97436 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm37169-201ENSMUST00000195599 4161 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm38120-201ENSMUST00000195506 4642 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm37525-201ENSMUST00000193499 2871 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 AC158988.1-201ENSMUST00000226731 2624 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm9226-201ENSMUST00000188352 3489 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 AC138284.1-201ENSMUST00000214258 3236 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm11799-201ENSMUST00000116110 460 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm7113-201ENSMUST00000120477 958 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm15502-201ENSMUST00000121449 208 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm25342-201ENSMUST00000157459 122 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm43850-201ENSMUST00000202021 578 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm7554-201ENSMUST00000202282 574 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm2926-201ENSMUST00000205625 239 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm18600-201ENSMUST00000207205 505 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm21731-201ENSMUST00000079524 489 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Gm3555-201ENSMUST00000160287 1395 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.76□□□□□ -1.49
Nkx3-1P97436 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Nkx3-1P97436 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm10555-201ENSMUST00000193178 1791 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm44863-201ENSMUST00000207613 1422 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm44185-201ENSMUST00000204539 3307 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Nkx3-1P97436 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm8250-201ENSMUST00000117398 774 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm11256-201ENSMUST00000118109 829 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm12447-201ENSMUST00000119110 470 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm15712-201ENSMUST00000120369 1156 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm12307-201ENSMUST00000120581 590 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm6977-201ENSMUST00000121568 512 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm12438-201ENSMUST00000122034 336 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.75□□□□□ -1.49
Nkx3-1P97436 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.75□□□□□ -1.49
Nkx3-1P97436 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms