Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm18586-201ENSMUST00000217265 518 ntBASIC5.51□□□□□ -1.53
SgcaP82350 AC158531.2-201ENSMUST00000224264 473 ntBASIC5.51□□□□□ -1.53
SgcaP82350 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.51□□□□□ -1.53
SgcaP82350 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SgcaP82350 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Gm23238-201ENSMUST00000083007 164 ntBASIC5.51□□□□□ -1.53
SgcaP82350 Gm7493-201ENSMUST00000085919 626 ntBASIC5.51□□□□□ -1.53
SgcaP82350 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SgcaP82350 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
SgcaP82350 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.51□□□□□ -1.53
SgcaP82350 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcaP82350 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Gm11558-201ENSMUST00000118454 459 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Gm11200-201ENSMUST00000121698 448 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC5.5□□□□□ -1.53
SgcaP82350 Gm15843-201ENSMUST00000146593 529 ntBASIC5.5□□□□□ -1.53
SgcaP82350 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.5□□□□□ -1.53
SgcaP82350 Gm23069-201ENSMUST00000158240 311 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Gm24883-201ENSMUST00000158391 281 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Gm20797-201ENSMUST00000177894 383 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcaP82350 Gm26528-201ENSMUST00000181965 283 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.5□□□□□ -1.53
SgcaP82350 Gm18698-201ENSMUST00000192327 668 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Gm43590-201ENSMUST00000195987 387 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SgcaP82350 Gm43108-201ENSMUST00000200525 293 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Gm44380-201ENSMUST00000203125 293 ntBASIC5.5□□□□□ -1.53
SgcaP82350 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcaP82350 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcaP82350 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcaP82350 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcaP82350 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcaP82350 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcaP82350 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcaP82350 AC130217.2-201ENSMUST00000224009 2990 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SgcaP82350 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SgcaP82350 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcaP82350 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcaP82350 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SgcaP82350 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.5□□□□□ -1.53
SgcaP82350 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SgcaP82350 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.49□□□□□ -1.53
SgcaP82350 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SgcaP82350 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
SgcaP82350 Gm24373-201ENSMUST00000104393 132 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Gm11581-201ENSMUST00000122024 763 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Gm26023-201ENSMUST00000122722 313 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.49□□□□□ -1.53
SgcaP82350 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 Gm7991-201ENSMUST00000168668 591 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SgcaP82350 Gm6536-201ENSMUST00000171180 615 ntBASIC5.49□□□□□ -1.53
SgcaP82350 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC5.49□□□□□ -1.53
SgcaP82350 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms