Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox6P40645 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox6P40645 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox6P40645 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox6P40645 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.15□□□□□ -1.43
Sox6P40645 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox6P40645 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Sox6P40645 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
Sox6P40645 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Sox6P40645 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
Sox6P40645 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Sox6P40645 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Sox6P40645 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm14865-201ENSMUST00000117523 494 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm14631-201ENSMUST00000119067 594 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm12535-201ENSMUST00000121025 484 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox6P40645 Gm16330-201ENSMUST00000128324 297 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm22728-201ENSMUST00000158087 129 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm9672-201ENSMUST00000166437 425 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Gm27158-201ENSMUST00000183813 238 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Mir8105-201ENSMUST00000184718 89 ntBASIC6.14□□□□□ -1.43
Sox6P40645 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox6P40645 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm17822-201ENSMUST00000204307 351 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm4585-201ENSMUST00000207218 452 ntBASIC6.14□□□□□ -1.43
Sox6P40645 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm10540-201ENSMUST00000097581 276 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sox6P40645 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.14□□□□□ -1.43
Sox6P40645 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.14□□□□□ -1.43
Sox6P40645 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC6.14□□□□□ -1.43
Sox6P40645 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.14□□□□□ -1.43
Sox6P40645 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox6P40645 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.13□□□□□ -1.43
Sox6P40645 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm25396-201ENSMUST00000103981 133 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm14755-201ENSMUST00000118037 384 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm12242-201ENSMUST00000118824 738 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm13735-201ENSMUST00000120217 670 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm12654-201ENSMUST00000120387 587 ntBASIC6.13□□□□□ -1.43
Sox6P40645 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox6P40645 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm21392-201ENSMUST00000182950 972 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm27782-201ENSMUST00000185059 199 ntBASIC6.13□□□□□ -1.43
Sox6P40645 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox6P40645 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox6P40645 Gm29470-201ENSMUST00000188007 696 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms