Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm29778-201ENSMUST00000201667 466 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm45473-201ENSMUST00000211452 616 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.42□□□□□ -1.22
Col2a1P28481 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.42□□□□□ -1.22
Col2a1P28481 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm8256-203ENSMUST00000228692 591 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col2a1P28481 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm22126-201ENSMUST00000083244 142 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col2a1P28481 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.42□□□□□ -1.22
Col2a1P28481 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC7.41□□□□□ -1.22
Col2a1P28481 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm6446-201ENSMUST00000120604 818 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm23894-201ENSMUST00000158107 313 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm25487-201ENSMUST00000158725 125 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm15257-201ENSMUST00000177680 883 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm15252-201ENSMUST00000177750 883 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm15256-201ENSMUST00000177793 883 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm5947-201ENSMUST00000179156 714 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm15260-201ENSMUST00000179402 883 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm5645-201ENSMUST00000179597 714 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.41□□□□□ -1.22
Col2a1P28481 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm44091-201ENSMUST00000205212 649 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col2a1P28481 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm23238-201ENSMUST00000083007 164 ntBASIC7.41□□□□□ -1.22
Col2a1P28481 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col2a1P28481 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col2a1P28481 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col2a1P28481 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col2a1P28481 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 AC122881.1-201ENSMUST00000225757 2695 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm8855-201ENSMUST00000118888 878 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Gm14805-201ENSMUST00000120172 340 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm24343-201ENSMUST00000158708 111 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Gm43501-201ENSMUST00000202513 107 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Gm45185-201ENSMUST00000207556 404 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col2a1P28481 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm28392-201ENSMUST00000077630 393 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col2a1P28481 Gm24405-201ENSMUST00000083033 167 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.4□□□□□ -1.22
Col2a1P28481 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col2a1P28481 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Col2a1P28481 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Col2a1P28481 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col2a1P28481 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms