Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Cdx1P18111 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.42□□□□□ -1.54
Cdx1P18111 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cdx1P18111 Gm15229-201ENSMUST00000146636 1398 ntBASIC5.42□□□□□ -1.54
Cdx1P18111 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Cdx1P18111 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdx1P18111 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm11970-201ENSMUST00000116105 320 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm14755-201ENSMUST00000118037 384 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm16056-201ENSMUST00000119293 135 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm25281-201ENSMUST00000157270 104 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm6472-202ENSMUST00000187973 582 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm37295-201ENSMUST00000192186 109 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm37225-201ENSMUST00000193423 325 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm44319-201ENSMUST00000196974 93 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm34144-201ENSMUST00000197039 259 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm18593-201ENSMUST00000200754 1139 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdx1P18111 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm44760-201ENSMUST00000206375 1173 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 AC192091.1-201ENSMUST00000218668 439 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 AC069562.1-201ENSMUST00000224206 434 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 AC106830.2-201ENSMUST00000226624 943 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 CT009556.4-201ENSMUST00000227092 200 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 AC123658.1-201ENSMUST00000228364 867 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdx1P18111 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm10108-201ENSMUST00000078246 319 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdx1P18111 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cdx1P18111 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cdx1P18111 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Cdx1P18111 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.41□□□□□ -1.54
Cdx1P18111 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cdx1P18111 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdx1P18111 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm38380-201ENSMUST00000195718 2248 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdx1P18111 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdx1P18111 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdx1P18111 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cdx1P18111 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm24869-201ENSMUST00000104072 128 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cdx1P18111 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm11318-201ENSMUST00000118640 961 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Gm12535-201ENSMUST00000121025 484 ntBASIC5.4□□□□□ -1.54
Cdx1P18111 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC5.4□□□□□ -1.54
Cdx1P18111 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms