Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.55□□□□□ -1.36
Lire1P11260 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm25760-201ENSMUST00000103989 132 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm16221-201ENSMUST00000117331 393 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm11371-201ENSMUST00000120294 385 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm14728-201ENSMUST00000122196 492 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm26183-201ENSMUST00000157685 139 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm6264-201ENSMUST00000160802 624 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm28871-201ENSMUST00000186191 687 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.55□□□□□ -1.36
Lire1P11260 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.55□□□□□ -1.36
Lire1P11260 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Lire1P11260 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Lire1P11260 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Lire1P11260 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Lire1P11260 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Lire1P11260 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.55□□□□□ -1.36
Lire1P11260 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Lire1P11260 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Lire1P11260 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Lire1P11260 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Lire1P11260 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Gm15913-201ENSMUST00000118492 331 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Gm12844-201ENSMUST00000119463 582 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Gm14531-201ENSMUST00000120845 285 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Gm12593-201ENSMUST00000120981 743 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Gm15316-201ENSMUST00000121082 421 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.54□□□□□ -1.36
Lire1P11260 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.54□□□□□ -1.36
Lire1P11260 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Lire1P11260 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.54□□□□□ -1.36
Lire1P11260 Gm20702-201ENSMUST00000176181 460 ntBASIC6.54□□□□□ -1.36
Lire1P11260 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.54□□□□□ -1.36
Lire1P11260 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Lire1P11260 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.54□□□□□ -1.36
Lire1P11260 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Lire1P11260 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.54□□□□□ -1.36
Lire1P11260 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.54□□□□□ -1.36
Lire1P11260 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms