Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mir466j-201ENSMUST00000116876 122 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Gm13222-201ENSMUST00000119638 138 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm3841-201ENSMUST00000191399 451 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.67□□□□□ -1.18
Col1a1P11087 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.67□□□□□ -1.18
Col1a1P11087 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 Gm6056-201ENSMUST00000221253 488 ntBASIC7.67□□□□□ -1.18
Col1a1P11087 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col1a1P11087 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col1a1P11087 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col1a1P11087 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.67□□□□□ -1.18
Col1a1P11087 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col1a1P11087 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC7.66□□□□□ -1.18
Col1a1P11087 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm37234-201ENSMUST00000193259 1441 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 AC153959.1-201ENSMUST00000213617 1694 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col1a1P11087 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm24989-201ENSMUST00000104461 88 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm8534-201ENSMUST00000118553 766 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm13930-201ENSMUST00000118569 368 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm7700-201ENSMUST00000120273 970 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm7931-201ENSMUST00000121537 271 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC7.66□□□□□ -1.18
Col1a1P11087 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Mir3572-201ENSMUST00000175549 86 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm6061-201ENSMUST00000175860 492 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm42886-201ENSMUST00000199214 466 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm45026-201ENSMUST00000205292 833 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm2996-201ENSMUST00000211398 537 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm10688-201ENSMUST00000214985 520 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm18409-202ENSMUST00000220105 529 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.66□□□□□ -1.18
Col1a1P11087 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.66□□□□□ -1.18
Col1a1P11087 AC166358.9-201ENSMUST00000220653 375 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 AC122034.1-201ENSMUST00000227641 595 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col1a1P11087 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Col1a1P11087 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.66□□□□□ -1.18
Col1a1P11087 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col1a1P11087 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Col1a1P11087 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm45477-201ENSMUST00000200213 5498 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col1a1P11087 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.65□□□□□ -1.18
Col1a1P11087 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm12229-201ENSMUST00000120487 468 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm15158-201ENSMUST00000120577 570 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm11852-201ENSMUST00000120806 222 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm15801-201ENSMUST00000120920 522 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm8783-201ENSMUST00000159764 522 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm8419-201ENSMUST00000189886 412 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col1a1P11087 Gm43176-201ENSMUST00000199653 2989 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm4742-201ENSMUST00000200261 771 ntBASIC7.65□□□□□ -1.18
Col1a1P11087 Gm42799-201ENSMUST00000201331 328 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms