Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm27299-201ENSMUST00000184593 103 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm28195-201ENSMUST00000186992 372 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm21728-201ENSMUST00000188442 695 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm21889-201ENSMUST00000188487 695 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm20932-201ENSMUST00000189115 694 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm21920-201ENSMUST00000190042 695 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm18781-201ENSMUST00000211252 924 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Mir7b-201ENSMUST00000083557 111 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp6P0C0A3 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm14550-201ENSMUST00000117918 407 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm13983-201ENSMUST00000118018 865 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm13222-201ENSMUST00000119638 138 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm14863-201ENSMUST00000119648 307 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm5871-201ENSMUST00000176461 718 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Mir5617-201ENSMUST00000176786 57 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Mir7212-201ENSMUST00000184098 61 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm3841-201ENSMUST00000191399 451 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm20128-201ENSMUST00000196189 417 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm43459-201ENSMUST00000202093 331 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm2767-201ENSMUST00000209582 473 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm35619-201ENSMUST00000222548 600 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Glycam1-204ENSMUST00000228895 641 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm29486-201ENSMUST00000088648 372 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm14849-201ENSMUST00000122293 2846 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.11□□□□□ -1.27
Chmp6P0C0A3 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Chmp6P0C0A3 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Chmp6P0C0A3 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Chmp6P0C0A3 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.1□□□□□ -1.27
Chmp6P0C0A3 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC7.1□□□□□ -1.27
Chmp6P0C0A3 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Chmp6P0C0A3 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms