Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Hmgb3O54879 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.26□□□□□ -1.57
Hmgb3O54879 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm22710-201ENSMUST00000116892 125 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm14279-201ENSMUST00000117142 332 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm10243-201ENSMUST00000117571 333 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm12242-201ENSMUST00000118824 738 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm11976-201ENSMUST00000119236 295 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm13207-201ENSMUST00000119862 773 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm12094-201ENSMUST00000121781 472 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm11263-201ENSMUST00000121853 749 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm26183-201ENSMUST00000157685 139 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Hmgb3O54879 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm29160-201ENSMUST00000190094 699 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm28341-201ENSMUST00000190883 472 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm8454-201ENSMUST00000196980 811 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm2860-201ENSMUST00000199226 707 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm44225-201ENSMUST00000203582 186 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm44044-201ENSMUST00000205178 1089 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC5.25□□□□□ -1.57
Hmgb3O54879 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC5.25□□□□□ -1.57
Hmgb3O54879 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.25□□□□□ -1.57
Hmgb3O54879 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 AC173482.3-201ENSMUST00000225492 1212 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 AC124450.1-201ENSMUST00000225569 495 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Hmgb3O54879 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm10247-201ENSMUST00000090395 333 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.25□□□□□ -1.57
Hmgb3O54879 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hmgb3O54879 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm37163-201ENSMUST00000195439 1690 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm25631-201ENSMUST00000104390 130 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm24473-201ENSMUST00000104483 131 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm13798-201ENSMUST00000118285 139 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm7113-201ENSMUST00000120477 958 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Defa-ps10-201ENSMUST00000121649 171 ntBASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hmgb3O54879 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms