Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 AC164437.5-201ENSMUST00000227235 4414 ntBASIC11.96□□□□□ -0.5
Ccdc180J3QNE4 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 AC156645.1-201ENSMUST00000223066 5194 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm23485-201ENSMUST00000104181 155 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm13626-201ENSMUST00000119435 402 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm14938-201ENSMUST00000119482 943 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm25459-201ENSMUST00000157953 114 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm17044-201ENSMUST00000168549 828 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Mir3097-201ENSMUST00000175356 67 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm19560-201ENSMUST00000177510 514 ntBASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc180J3QNE4 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm7146-201ENSMUST00000116079 739 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm14550-201ENSMUST00000117918 407 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm20401-201ENSMUST00000173717 212 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm27024-201ENSMUST00000182561 755 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm37375-201ENSMUST00000193859 387 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm37385-201ENSMUST00000195223 387 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm43798-201ENSMUST00000202056 394 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 AC159979.1-201ENSMUST00000227927 342 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm43618-201ENSMUST00000197392 3451 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm16204-201ENSMUST00000117864 1897 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm22372-201ENSMUST00000104589 136 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm7189-201ENSMUST00000119811 429 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm9274-201ENSMUST00000182505 984 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm27210-201ENSMUST00000184263 402 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm5717-201ENSMUST00000198243 1062 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 AC122251.2-201ENSMUST00000227341 603 ntBASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc180J3QNE4 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 AC139941.2-201ENSMUST00000221565 1824 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 AC174797.5-201ENSMUST00000225055 1860 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gm14173-201ENSMUST00000117690 278 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gm13137-201ENSMUST00000118035 345 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gm16074-201ENSMUST00000119524 444 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gm13222-201ENSMUST00000119638 138 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gm7802-201ENSMUST00000216464 262 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 AC154633.1-201ENSMUST00000223276 449 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gm2531-201ENSMUST00000075609 512 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Gm37735-201ENSMUST00000193995 1406 ntBASIC11.93□□□□□ -0.5
Ccdc180J3QNE4 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm37725-201ENSMUST00000193965 2125 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Gm42508-201ENSMUST00000199972 3292 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC11.92□□□□□ -0.5
Ccdc180J3QNE4 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms