Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm15090-201ENSMUST00000118787 1196 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm15089-201ENSMUST00000122332 1196 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm2966-201ENSMUST00000166052 481 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm17204-201ENSMUST00000167936 478 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm27849-201ENSMUST00000183673 125 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Mir7037-201ENSMUST00000184414 65 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm29141-201ENSMUST00000190357 882 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm45497-201ENSMUST00000211701 740 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm19340-201ENSMUST00000221995 345 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm42852-201ENSMUST00000202649 1379 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
NpcdF8VQB8 AC124516.1-201ENSMUST00000221845 3544 ntBASIC8.57□□□□□ -1.04
NpcdF8VQB8 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm4991-201ENSMUST00000118899 1552 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm22426-201ENSMUST00000103811 96 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Snord88a-201ENSMUST00000116723 90 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm5255-201ENSMUST00000120125 642 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm4992-201ENSMUST00000120256 768 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm13282-201ENSMUST00000121577 545 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm24011-201ENSMUST00000157732 268 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm17061-201ENSMUST00000163167 499 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm17137-202ENSMUST00000165729 957 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm23633-201ENSMUST00000175293 119 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm6055-201ENSMUST00000180532 378 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28739-201ENSMUST00000185415 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28219-201ENSMUST00000185452 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28542-201ENSMUST00000185545 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28303-201ENSMUST00000185642 747 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm29244-201ENSMUST00000185825 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm29437-201ENSMUST00000185865 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm29412-201ENSMUST00000185869 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28910-201ENSMUST00000185921 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28812-201ENSMUST00000185963 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm29468-201ENSMUST00000185978 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28854-201ENSMUST00000186218 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28636-201ENSMUST00000186353 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28452-201ENSMUST00000186623 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm8506-201ENSMUST00000186661 829 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm29298-201ENSMUST00000186704 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28185-201ENSMUST00000186815 694 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28227-201ENSMUST00000186862 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28796-201ENSMUST00000186905 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm29659-201ENSMUST00000187063 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28473-201ENSMUST00000187325 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28682-201ENSMUST00000187430 696 ntBASIC8.56□□□□□ -1.04
NpcdF8VQB8 Gm28738-201ENSMUST00000187480 696 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms