Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Mir708-201ENSMUST00000102189 109 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm25795-201ENSMUST00000104421 132 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm13835-201ENSMUST00000118459 685 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm4660-201ENSMUST00000131499 403 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm37103-201ENSMUST00000191830 115 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm37463-201ENSMUST00000193819 796 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm45196-201ENSMUST00000206751 825 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Scn3aA2ASI5 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm24989-201ENSMUST00000104461 88 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm14529-201ENSMUST00000117894 406 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm26169-201ENSMUST00000158420 135 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Mir7072-201ENSMUST00000184542 60 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm5708-201ENSMUST00000196289 886 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Scn3aA2ASI5 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Scn3aA2ASI5 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms