Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm13604-201ENSMUST00000119332 482 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm11504-201ENSMUST00000120211 173 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm22094-201ENSMUST00000158976 117 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm9529-201ENSMUST00000177598 579 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm28023-201ENSMUST00000184556 60 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm27825-201ENSMUST00000184586 60 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Mir425-201ENSMUST00000083645 85 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.51□□□□□ -1.37
H2afb2S4R1M3 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
H2afb2S4R1M3 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm38124-201ENSMUST00000191710 2581 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm25593-201ENSMUST00000102272 96 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm7821-201ENSMUST00000117111 788 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm12842-201ENSMUST00000117298 476 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm12540-201ENSMUST00000121938 319 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm12518-201ENSMUST00000122075 779 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm25435-201ENSMUST00000158277 267 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Mir6367-201ENSMUST00000183385 102 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm18447-201ENSMUST00000187501 307 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm43459-201ENSMUST00000202093 331 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.5□□□□□ -1.37
H2afb2S4R1M3 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
H2afb2S4R1M3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm25093-201ENSMUST00000103993 132 ntBASIC6.49□□□□□ -1.37
H2afb2S4R1M3 Gm25344-201ENSMUST00000104503 132 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms