Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
H2afb3S4R1G7 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
H2afb3S4R1G7 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
H2afb3S4R1G7 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm22774-201ENSMUST00000102084 109 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm25757-201ENSMUST00000103986 123 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm23437-201ENSMUST00000104036 127 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm26416-201ENSMUST00000104280 134 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm23834-201ENSMUST00000104436 129 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm8534-201ENSMUST00000118553 766 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm15081-201ENSMUST00000119794 844 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm25969-201ENSMUST00000157166 132 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm24756-201ENSMUST00000177002 96 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm18428-201ENSMUST00000194986 791 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm17937-201ENSMUST00000197908 742 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm43040-201ENSMUST00000202399 558 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm44137-201ENSMUST00000203670 367 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm18242-201ENSMUST00000218455 542 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 AC121912.1-201ENSMUST00000227525 1201 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 AC115357.1-201ENSMUST00000227575 466 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
H2afb3S4R1G7 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm17184-201ENSMUST00000111864 462 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm25317-201ENSMUST00000116824 129 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Mir1192-201ENSMUST00000116976 121 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm9440-201ENSMUST00000119667 539 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm12978-201ENSMUST00000121250 522 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm12001-201ENSMUST00000121727 913 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm25770-201ENSMUST00000158566 115 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm7244-201ENSMUST00000164658 455 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm17786-201ENSMUST00000182000 427 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm29197-201ENSMUST00000185922 702 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm6197-201ENSMUST00000192273 454 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm42883-201ENSMUST00000202594 222 ntBASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.05□□□□□ -1.44
H2afb3S4R1G7 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms