Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm14457-201ENSMUST00000148069 1161 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm25722-201ENSMUST00000157498 279 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm20637-201ENSMUST00000175715 462 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm19480-201ENSMUST00000185547 667 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm44342-201ENSMUST00000196874 129 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm44383-201ENSMUST00000198940 129 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim3Q9R1R2 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm22256-201ENSMUST00000102291 107 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm13141-201ENSMUST00000117417 456 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm15129-201ENSMUST00000119673 279 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm11581-201ENSMUST00000122024 763 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm25116-201ENSMUST00000157191 122 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm21301-201ENSMUST00000189476 699 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm30646-201ENSMUST00000207662 180 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm2754-201ENSMUST00000223383 589 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Trim3Q9R1R2 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim3Q9R1R2 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms