Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Mir678-201ENSMUST00000102114 84 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm26037-201ENSMUST00000158150 311 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm20637-201ENSMUST00000175715 462 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm27601-201ENSMUST00000184794 127 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm38030-201ENSMUST00000192376 475 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm8454-201ENSMUST00000196980 811 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm5853-201ENSMUST00000197183 632 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm43929-201ENSMUST00000203025 409 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm45196-201ENSMUST00000206751 825 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm7780-201ENSMUST00000214787 406 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm46364-201ENSMUST00000218548 319 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.3□□□□□ -1.4
Upk3aQ9JKX8 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm25989-201ENSMUST00000158761 133 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm26607-201ENSMUST00000180661 867 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Mir8097-201ENSMUST00000185150 119 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm30646-201ENSMUST00000207662 180 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm2225-201ENSMUST00000209570 377 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm19340-201ENSMUST00000221995 345 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Upk3aQ9JKX8 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Upk3aQ9JKX8 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms