Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Gm38331-201ENSMUST00000195719 2671 ntBASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Gm45262-201ENSMUST00000209917 1463 ntBASIC7.24□□□□□ -1.25
Trim39Q9ESN2 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm37356-201ENSMUST00000193362 1613 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm26344-201ENSMUST00000104553 132 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Mir190b-201ENSMUST00000104803 80 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm11348-201ENSMUST00000118813 318 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm16297-201ENSMUST00000161466 459 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm20432-201ENSMUST00000173716 250 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm5974-201ENSMUST00000181607 986 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm8676-201ENSMUST00000184206 637 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm28956-201ENSMUST00000189047 427 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm18296-201ENSMUST00000192475 783 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm38063-201ENSMUST00000193990 342 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm17895-201ENSMUST00000194028 874 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm37929-201ENSMUST00000195116 493 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm6522-201ENSMUST00000197160 1203 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm42850-201ENSMUST00000202094 201 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm4874-201ENSMUST00000203589 691 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm44277-201ENSMUST00000205128 649 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm7482-201ENSMUST00000206446 505 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 AC122539.2-201ENSMUST00000220207 404 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 AL645704.1-201ENSMUST00000221642 604 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 AC165146.1-201ENSMUST00000223777 900 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 AC154506.3-201ENSMUST00000225417 213 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm25404-201ENSMUST00000082970 107 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm26132-201ENSMUST00000083166 148 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Trim39Q9ESN2 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.22□□□□□ -1.25
Trim39Q9ESN2 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.22□□□□□ -1.25
Trim39Q9ESN2 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms