Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Gm13669-201ENSMUST00000122366 457 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 BC064078-201ENSMUST00000122939 570 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Gm36965-201ENSMUST00000193797 394 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Gm5119-201ENSMUST00000215858 634 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Gm18040-201ENSMUST00000217922 827 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Mir296-201ENSMUST00000083587 79 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Wnk1-218ENSMUST00000161512 1426 ntBASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
Smc1aQ9CU62 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm13878-201ENSMUST00000117986 577 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm20549-201ENSMUST00000174804 429 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm26738-201ENSMUST00000181312 601 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm44943-201ENSMUST00000207254 300 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm3678-201ENSMUST00000218888 492 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm36758-201ENSMUST00000222594 310 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.43□□□□□ -1.22
Smc1aQ9CU62 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm11445-201ENSMUST00000119101 532 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm21614-201ENSMUST00000183260 1005 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28739-201ENSMUST00000185415 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28219-201ENSMUST00000185452 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28542-201ENSMUST00000185545 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28303-201ENSMUST00000185642 747 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29244-201ENSMUST00000185825 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29437-201ENSMUST00000185865 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29412-201ENSMUST00000185869 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28910-201ENSMUST00000185921 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28812-201ENSMUST00000185963 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm29468-201ENSMUST00000185978 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28335-201ENSMUST00000186204 696 ntBASIC7.42□□□□□ -1.22
Smc1aQ9CU62 Gm28854-201ENSMUST00000186218 696 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms