Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm21392-201ENSMUST00000182950 972 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm27156-201ENSMUST00000184589 754 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm25617-202ENSMUST00000198387 132 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm43371-201ENSMUST00000202838 1031 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm19764-201ENSMUST00000203630 649 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm17950-201ENSMUST00000214617 646 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 AC172027.1-201ENSMUST00000217659 337 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Usp11Q99K46 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp11Q99K46 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp11Q99K46 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp11Q99K46 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Usp11Q99K46 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm42894-201ENSMUST00000200788 3390 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.92□□□□□ -1.3
Usp11Q99K46 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.92□□□□□ -1.3
Usp11Q99K46 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Mir708-201ENSMUST00000102189 109 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm2178-201ENSMUST00000104927 357 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm6987-201ENSMUST00000119319 428 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm6067-201ENSMUST00000121648 491 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm15171-201ENSMUST00000122191 334 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm25395-201ENSMUST00000157343 272 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm9359-201ENSMUST00000163721 1221 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm17046-201ENSMUST00000168078 850 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm6061-201ENSMUST00000175860 492 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm29141-201ENSMUST00000190357 882 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm35323-201ENSMUST00000191836 499 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm43124-201ENSMUST00000201878 278 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm34272-201ENSMUST00000208886 253 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm2754-201ENSMUST00000223383 589 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Usp11Q99K46 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Usp11Q99K46 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.91□□□□□ -1.3
Usp11Q99K46 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.9□□□□□ -1.3
Usp11Q99K46 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.9□□□□□ -1.3
Usp11Q99K46 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Usp11Q99K46 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms