Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm32899-201ENSMUST00000219694 207 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Lsm1Q8VC85 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Lsm1Q8VC85 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Lsm1Q8VC85 Gm42975-201ENSMUST00000200612 1491 ntBASIC6.34□□□□□ -1.4
Lsm1Q8VC85 Gm38200-201ENSMUST00000192083 2111 ntBASIC6.34□□□□□ -1.4
Lsm1Q8VC85 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.34□□□□□ -1.4
Lsm1Q8VC85 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm25760-201ENSMUST00000103989 132 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm7091-201ENSMUST00000116438 586 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm13744-201ENSMUST00000118953 850 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm13754-201ENSMUST00000120486 998 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 AC129597.1-201ENSMUST00000223046 1234 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Lsm1Q8VC85 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.33□□□□□ -1.4
Lsm1Q8VC85 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm11342-203ENSMUST00000224879 1324 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Mir674-201ENSMUST00000102421 100 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm13400-201ENSMUST00000117436 380 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm15311-201ENSMUST00000119682 282 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm15305-201ENSMUST00000120354 288 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm22820-201ENSMUST00000157205 329 ntBASIC6.32□□□□□ -1.4
Lsm1Q8VC85 Gm20432-201ENSMUST00000173716 250 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms