Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.59□□□□□ -1.35
Vps39Q8R5L3 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm42782-201ENSMUST00000197286 522 ntBASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm8182-201ENSMUST00000197863 769 ntBASIC6.59□□□□□ -1.35
Vps39Q8R5L3 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm45725-201ENSMUST00000212962 337 ntBASIC6.59□□□□□ -1.35
Vps39Q8R5L3 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Vps39Q8R5L3 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Vps39Q8R5L3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Vps39Q8R5L3 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Vps39Q8R5L3 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Vps39Q8R5L3 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm15311-201ENSMUST00000119682 282 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm15305-201ENSMUST00000120354 288 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm26211-201ENSMUST00000158578 129 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm6562-201ENSMUST00000221903 464 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.58□□□□□ -1.36
Vps39Q8R5L3 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Snord88a-201ENSMUST00000116723 90 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm14587-201ENSMUST00000121714 658 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm16112-201ENSMUST00000159075 382 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm26381-201ENSMUST00000174895 92 ntBASIC6.57□□□□□ -1.36
Vps39Q8R5L3 Gm23810-201ENSMUST00000175150 74 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms