Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm18875-201ENSMUST00000188563 882 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28620-201ENSMUST00000190463 439 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm4525-201ENSMUST00000198831 254 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 AC102582.1-201ENSMUST00000215376 378 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.8□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm13463-201ENSMUST00000119020 233 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm22728-201ENSMUST00000158087 129 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm23071-201ENSMUST00000158242 115 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm16138-201ENSMUST00000159341 821 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm5456-201ENSMUST00000170706 844 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm25640-201ENSMUST00000175378 125 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm17045-201ENSMUST00000178600 844 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm36965-201ENSMUST00000193797 394 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm9517-201ENSMUST00000195021 874 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm17822-201ENSMUST00000204307 351 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm2996-201ENSMUST00000211398 537 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 AC129017.2-201ENSMUST00000226118 1284 ntBASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc28aQ8CEI3 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm9839-201ENSMUST00000195252 1437 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm14201-201ENSMUST00000117627 289 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm11925-201ENSMUST00000121375 535 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm15187-201ENSMUST00000122329 264 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.78□□□□□ -1.32
Ccdc28aQ8CEI3 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms