Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm37189-201ENSMUST00000192131 298 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm36965-201ENSMUST00000193797 394 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm17895-201ENSMUST00000194028 874 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Nup88Q8CEC0 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm25785-201ENSMUST00000104129 125 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm11833-201ENSMUST00000118393 853 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Mir1953-201ENSMUST00000157866 89 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm24176-201ENSMUST00000158928 121 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm22990-201ENSMUST00000175427 89 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm27507-201ENSMUST00000184199 93 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm27804-201ENSMUST00000185135 119 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm37493-201ENSMUST00000193167 433 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm9504-201ENSMUST00000196322 468 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm43089-201ENSMUST00000199162 275 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm43459-201ENSMUST00000202093 331 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm5928-201ENSMUST00000221839 466 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm6562-201ENSMUST00000221903 464 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 AC132954.2-201ENSMUST00000222400 403 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Nup88Q8CEC0 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 AC153971.1-201ENSMUST00000215097 3811 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm26340-201ENSMUST00000102365 99 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm13400-201ENSMUST00000117436 380 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm12540-201ENSMUST00000121938 319 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm24781-201ENSMUST00000157636 117 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm25717-201ENSMUST00000158631 353 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm20454-201ENSMUST00000172713 221 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Gm29470-201ENSMUST00000188007 696 ntBASIC7.75□□□□□ -1.17
Nup88Q8CEC0 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Nup88Q8CEC0 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms